Package index • landisutils

All functions

BiomassSuccession: Biomass Succession Extension
DynamicFire: Dynamic Fire System Extension
DynamicFuels: Dynamic Fuel System Extension
ForCS: Forest Carbon Succession (ForCS) Extension
LandisClimateConfig: LandisClimateConfig class
LandisExtension: LandisExtension class
LandisScenario: LandisScenario class
MapNames(): Create Map Names pattern for file outputs
OriginalFire: Original Fire Extension
OutputBiomass: Biomass Output Extension
OutputBiomassByAge: Biomass Output by Age Extension
OutputCohortStats: Cohort Statistics Extension
OutputMaxSpeciesAge: Max Species Age Extension
SocialClimateFire: Social-Climate-Fire Extension
appendPercent(): Ensure percent symbol appended to table values
calibrate_original_fire(): Calibrate Original Fire
defaultFireDamageTable(): Create sample Fire Damage Table
defaultFuelCurveTable(): Create sample Fuel Curve Table
defaultFuelTypeTable(): Create default Fuel Type Table
insertANPPTimeSeries(): Specify ANPPTimeSeries for Forest Carbon Succession (ForCS) extension
insertAvailableLightBiomass(): Specify AvailableLightBiomass for Forest Carbon Succession (ForCS) extension
insertBuildUpIndex(): Specify Dynamic Fire Extension BuildUpIndex
insertClimateConfigFile(): Specify ClimateConfigFile
insertDOMPools(): Specify DOMPools for Forest Carbon Succession (ForCS) extension
insertDisturbanceConversionTable(): Specify Dynamic Fuel Extension's Disturbance Conversion Table
insertEcoSppDOMParameters(): Specify EcoSppDOMParameters for Forest Carbon Succession (ForCS) extension
insertEcoregionParameters(): Specify EcoregionParameters table
insertEcoregionTable(): Specify Dynamic Fuel Extension's Ecoregion Table
insertEcoregionsFiles(): Specify Ecoregions and EcoregionsMap Files
insertEstablishProbabilities(): Specify EstablishProbabilities for Forest Carbon Succession (ForCS) extension
insertSuccessionExtensions() insertDisturbanceExtensions() insertOtherExtensions(): Specify Scenario Extensions Tables
insertFireReductionParameters(): Specify Biomass Succession Extension FireReductionParameters Table
insertFireRegionParametersTable(): Specify Fire Region Parameters Table
insertFireSizesTable(): Specify Fire Size Table
insertForCSProportions(): Specify ForCSProportions for Forest Carbon Succession (ForCS) extension
insertFuelCurveTable(): Specify Original Fire FuelCurveTable
insertFuelTypeTable(): Specify Dynamic Fire Extension FuelTypeTable
insertFuelTypesTable(): Specify Dynamic Fuel Extension's Fuel Types Table
insertGroundSlopeFile(): Specify Dynamic Fire Extension GroundSlopeFile
insertHarvestReductionParameters(): Specify Biomass Succession Extension HarvestReductionParameters Table
insertInitialCommunities(): Specify InitialCommunities and InitialCommunitiesMap Files
insertLightEstablishmentTable(): Specify LightEstablishmentTable for Forest Carbon Succession (ForCS) extension
insertMaxBiomassTimeSeries(): Specify MaxBiomassTimeSeries for Forest Carbon Succession (ForCS) extension
insertMinRelativeBiomass(): Specify Biomass Succession Extension MinRelativeBiomass Table
insertOutputTables(): Specify OutputTables for Forest Carbon Succession (ForCS) extension
insertRandomNumberSeed(): Specify Scenario RandomNumberSeed
insertRootDynamics(): Specify RootDynamics for Forest Carbon Succession (ForCS) extension
insertSeasonTable(): Specify Dynamic Fire Extension's Season Table
insertSoilSpinupControls(): Specify SoilSpinup for Forest Carbon Succession (ForCS) extension
insertSpeciesDataFile(): Specify Species Data File
insertSpeciesEcoregionDataFile(): Specify SpeciesEcoregionData File
insertSpeciesFuelCoefficients(): Specify Dynamic Fuel Extension's Species Fuel Coefficients
insertSpeciesParameters(): Specify SpeciesParameters for Forest Carbon Succession (ForCS) extension
insertSufficientLight(): Specify Biomass Succession Extension SufficientLight Table
insertUphillSlopeAzimuthMap(): Specify Dynamic Fire Extension UphillSlopeAzimuthMap
insertWindCurveTable(): Specify Original Fire WindCurveTable
landis_find(): Find an installed version of LANDIS-II
landis_process() landis_run(): Run a LANDIS-II simulation from the R session
prepClimateConfig(): Create ClimateConfigFile
prepClimateFile(): Prepare ClimateFile for Forest Carbon Succession (ForCS) extension
prepDisturbanceConversionTable(): Create Dynamic Fire Extension's Disturbance Conversion Table
prepDisturbanceMatrixFile(): Prepare DisturbanceMatrixFile for Forest Carbon Succession (ForCS) extension
prepDynamicEcoregionTable(): Prepare Dynamic Fire Extension DynamicEcoregionTable
prepDynamicWeatherTable(): Prepare Dynamic Fire Extension DynamicWeatherTable
prepEcoregionParameters(): Create Ecoregion Parameters Table
prepEcoregionsFiles(): Create Ecoregions and EcoregionsMap Files
prepFireReductionParameters(): Prepare Biomass Succession Extension FireReductionParameters Table
prepFireRegionParametersTable(): Prepare Original Fire Extension FireRegionParameters Table
prepFireSizesTable(): Prepare Dynamic Fire Extension FireSizes Table
prepFuelTypesTable(): Create Dynamic Fire Extension's Fuel Types Table
prepHarvestReductionParameters(): Prepare Biomass Succession Extension HarvestReductionParameters Table
prepInitialCommunities(): Create InitialCommunities and InitialCommunitiesMap Files
prepInitialFireRegionsMap(): Create Original Fire InitialFireRegionsMap
prepInitialWeatherDatabase(): Create Dynamic Fire Extension's Initial Weather Database
prepMinRelativeBiomass(): Prepare Biomass Succession Extension MinRelativeBiomass Table
prepSnagFile(): Prepare SnagFile for Forest Carbon Succession (ForCS) extension
prepSpeciesData(): Species Data File
prepSpeciesEcoregionDataFile(): Create Species Ecoregion Data File
prepSuppression_CSV_File(): Prepare Suppression_CSV_File for Social-Climate-Fire extension
prepTopographyFile() prepGroundSlopeFile() prepUphillAzimuthMap(): Prepare topographical raster files
prep_daily_weather() prep_monthly_weather(): Prepare Climate Data
proj_daymet: PROJ4 strings for climate data
proj_nrcan_lcc: PROJ4 strings for forest data
scenario(): Create LANDIS-II scenario files
simplifyCohorts(): Simplify cohorts
writeClimateData(): Write LANDIS-II Climate Input File to disk
yesno(): Convert logical to "yes" or "no"