Biomass Output by Age Extension

References

LANDIS-II Biomass-by-Age Output v4.0 Extension User Guide https://github.com/LANDIS-II-Foundation/Extension-Output-Biomass-By-Age/blob/master/docs/LANDIS-II%20Biomass-by-Age%20Output%20v4.0%20User%20Guide.pdf

Super class

LandisExtension -> OutputBiomassByAge

Active bindings

MapNames: Character. File pattern for writing outputs to disk.
Species: Character vector of species names with age classes.

Methods

Inherited methods

LandisExtension$add_file()

`OutputBiomassByAge$new()`

Usage

OutputBiomassByAge$new(
  path = NULL,
  Timestep = 10L,
  MapNames = NULL,
  Species = NULL
)

Arguments

path: Character. Directory path.
Timestep: Integer.
MapNames: Character. File pattern for writing outputs to disk.
Species: Character vector of species names with age classes.

`OutputBiomassByAge$write()`

Write extension inputs to disk

Usage

OutputBiomassByAge$write()

`OutputBiomassByAge$clone()`

The objects of this class are cloneable with this method.

Usage

OutputBiomassByAge$clone(deep = FALSE)

Arguments

deep: Whether to make a deep clone.

Examples

biomass_by_age <- OutputBiomassByAge$new(
  path = tempdir(),
  Timestep = 10,
  MapNames = NULL, # use default
  Species = c(
    "pinubank ageclass1(10-40) ageclass2(15-100)",
    "pinuresi ageclass(>200)",
    "pinustro ageclass(>250)",
    "poputrem ageclass1(<50)"
  )
)

biomass_by_age$write()