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Prepare PnET-Succession PNEToutputsites input file

prepPNEToutputsites.Rd

Writes the PNEToutputsites input file (§12 of the user guide), which lists individual sites at which detailed PnET output tables are requested. Two coordinate forms are supported:

Usage

prepPNEToutputsites(
  df = NULL,
  path,
  coords = c("rowcol", "map"),
  filename = "PNEToutputsites.txt"
)

Arguments

df

data.frame whose first column (Site) names each site, with the remaining columns matching coords.

path

Character. Path specifying a directory to use for the scenario runs.

coords

Character, one of "map" or "rowcol". Default "rowcol".

filename

Character, specifying a filename (will be appended to path).

Value

Character string(s) specifying suitable LANDIS-II input file(s), created as a side effect of the function.

Details

  • map coordinates (coords = "map"): four numeric columns MapCoordinatesX, MapCoordinatesY, MapCoordinatesMaxX, MapCoordinatesMaxY.

  • row/column coordinates (coords = "rowcol"): two integer columns Row, Column.

See also

Other PnET Succession helpers: PnETSuccession, defaultPnETDisturbanceReductions(), prepPnETClimateFile(), prepPnETDisturbanceReductions(), prepPnETEcoregionParameters(), prepPnETGenericParameters(), prepPnETSpeciesParameters()