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Build a design crossing landscape cohort structures with a parameter sweep

growth_structure_design.Rd

For each structure and each species in it, generates one cell per (shape combination, ecoregion), with the chosen species represented by a swept pseudo-species and every other species by a held-fixed pseudo-species carrying its calibrated values in every ecoregion.

Usage

growth_structure_design(
  structures,
  growth_params,
  grid = NULL,
  max_structures = NULL,
  max_cells = 400000L
)

Arguments

structures

A data frame of landscape cohort structures, with one row per cohort and a structure_id grouping the cohorts of a cell.

growth_params

The parameters currently in use, restricted to the calibrated species; see growth_calibration_design().

grid

Optional sweep grid, as for growth_calibration_design().

max_structures

Integer or NULL. Keep only the N structures covering the most communities. NULL keeps all of them.

max_cells

Integer. Refuse to build a design larger than this.

Value

A cohort table: one row per cohort, several per mixed cell.

See also

Other growth calibration helpers: extract_landscape_cohort_structures(), growth_add_objective(), growth_auto_window(), growth_best_candidates(), growth_bin_observations(), growth_calibration_design(), growth_calibration_partition(), growth_calibration_work_root(), growth_climatic_distance(), growth_climatic_weight(), growth_expand_over_pseudo_species(), growth_factorial_ratio_grid(), growth_fitting_windows(), growth_identifiability(), growth_inflation_factor(), growth_mortality_onset_frac(), growth_plot_palette(), growth_pseudo_species_name(), growth_reference_curves(), growth_reference_inflection(), growth_score_fit(), growth_scoring_for(), growth_smooth_observations(), growth_structure_cell_curves(), growth_structure_cohort_table(), growth_structure_summary(), growth_window_for(), plot_growth_calibration(), plot_growth_candidate(), plot_growth_factorial_sensitivity(), plot_growth_structures(), read_growth_scoring(), read_landscape_cohort_structures(), scale_linetype_growth_reference(), write_growth_review_bundle()